Friday, March 30, 2012

Fossils Part 2


Fossilization (Taphonomy)
Critical part of the process known as taphonomy, or the study of remains of organisms after they die (the word was derived from the Greek taphos, meaning grave-burial, and nomos, meaning law). The concept was introduced to paleontology in 1940 by the prominent Russian paleontologist and science fiction author Ivan Efremov (also spelled Yefremov) to describe the study of the transition of organic remains, including entire intact bodies, dissembled parts or products, from the biosphere to the lithosphere, meaning the eventual conversion of living organisms to fossil assemblages.

The motivation behind the study of taphonomy is to better understand biases present in the fossil record. Although fossils may seem to some to be ubiquitous in sedimentary rocks, they are actually somewhat rare. Paleontologists cannot draw the most accurate conclusions about the lives and ecology of the fossilized organisms without identifying and understanding the processes involved in their fossilization. Therefore, taphonomy includes the organism’s life-history, type-location of death, decomposition, post-mortem transport (if any), burial, compaction, and other chemical, biologic, or physical activities that affect the remains of an organism. Recognition of taphonomic processes that have taken place leads to a more complete understanding of paleoecology and even the life-history of a once-living organism.

Since most of those who study geoscience know that the world is very old and that many billions of animals have lived and died between the time when plants and animals first appeared, why is the environment not simply awash in fossils? Here’s the answer in a nutshell: because for organisms death is guaranteed while preservation is not.

To understand that answer we have to focus on the underlying problem: how does anything become fossilized? And that’s where taphonomy comes in, by elucidating critical elements in the taphonomic process: life—death—preservation—survival—discovery. The fossilization process starts with life (as many young student observers of tenured university faculty and administrators approaching retirement will readily attest) because the way an organism lives provides a bias with respect to its potential for preservation.

Organisms living in or in close proximity to lacustrine or tidal marsh environments have much greater chances of having their remains rapidly covered with sediments and fossilized than do condors or mountain goats living in a desert far from most sources of rapid burial and sedimentation. As an example of a life having high fossilization potential, imagine a shore bird falling dead in a near-shore environment where its feathers are weighed down with clay-rich water and that night and the next many nights it is covered with an inch or more of sand, silt or mud until it is buried under several yards of moist, heavy materials. Moreover, an animal’s position in the food web also affects its fossilization potential since organisms at the bottom of the web are far more numerous than the top predators.

Real World Examples of animals whose lives and deaths and preservation contributed to very high fossilization potentials are those so remarkably preserved in the Burgess Shale and the recently discovered nearly complete fossil skeleton of an ancient aquatic bird in the Gansu area of China, Gansus yumenensis.[1] How and where an organism dies also affects its fossilization potential. For example, a zebra dying on the South African veldt stands next to no chance of being preserved since either predators or scavengers (including those that crush and eat the bones) would clean up its remains like hungry teenagers disappearing a fast-food meal. But the chances of fossilization of a clam or a crab dying at the beach are considerably greater.

Preservation encompasses ways an organism’s remains survive after death and its transition into a fossil. Rapid burial is the best method to ensure transition into the preservation stage and is a common process at the Earth’s surface that occurs on a regular basis (again, the Burgess Shale is a wonderful example). Floods, mass wasting episodes, storms, and volcanic eruptions can deposit sediments over periods of time ranging from minutes to days. A well-known historical example is the sudden volcanic ash fall that buried Pompeii and Herculaneum.

Fun Stuff: Actual examples of what might humorously be called “fossil” graffiti preserved on the walls of the two Roman cities include:

“Atimetus got me pregnant.”
“I fucked a lot of girls here.”
“Phileros is a eunuch.”
“Once you are dead, you are nothing.”
“May I always and everywhere be as potent with women as I was here.”

Back to more serious stuff. Not all types of landscapes are preserved equally in the geological record, leading to a heavy bias towards shallow, near-shore marine and lacustrine environments. In addition, not all periods of geological history are preserved equally, witness the paucity of fossils from periods earlier than the Cambrian. Recent Earth history is far better preserved if only because not as much time has elapsed during which erosion or destruction via heat and pressure can occur. Burial also protects the dead organism from being consumed by higher or lower food chain organisms and from mechanical (abrasion and break-up) and chemical (decay and disintegration) processes. Although in the vast majority of cases decay is an inevitable part of death, organisms with hard parts (shell, bone, claws, teeth) have a much higher preservation potential than organisms that are entirely soft-bodied or that possess fragile hard parts.

Preservation comes in various types. An unaltered state is the rarest form of preservation in the far greater majority of the geologic record in which fossils are found but is more frequent in recently formed sedimentary environments. Types of unaltered preservation where even the soft body parts are preserved include: mummification, encasement in tar or other hydrocarbons (as can be seen at the Rancho La Brea Pits in Los Angeles), encasement in amber (such as frogs, insects, or leaves), encasement in sediment, and freezing, as in the case of an 18,000-year-old frozen Siberian woolly mammoth that was on display at the 2005 World Exposition in Aichi, Japan. However, most commonly only the hard skeletal materials are preserved after decomposition of soft body parts.

Preservation by means of molds and casts entails creation of a type of replica of the organism’s hard parts. In general, a mold is an impression of a bone or shell in lithified sediment, forming a mirror image of the original part. Molds can be internal, an impression of the inside surface of skeletal hard parts, or external, an impression of the outside surface. A cast is formed when a mold is filled with fine sediment and is therefore a true replica not a mirror image of the original hard part.

A common form of preservation involves dissolution and replacement or recrystallization (alteration) of original hard materials by chemical or physical means. Replacement, sometimes on a molecule by molecule basis, most often occurs when various minerals, typically contained in percolating groundwater, fill in voids after dissolution of original skeletal material. Common secondary replacement minerals include silica (SiO2) and pyrite (FeS2). The process of the physical re-arrangement of crystalline structure of skeletal material is known as recrystallization, which is a common phenomenon in shells that were originally aragonite or calcite (both forms of calcium carbonate—CaCO3).

Carbonization or the formation of carbon films is another type of fossilization and is typical for such organisms as plants and insects. After an organism (most typically a plant) dies, internal volatile organic compounds disperse and leave behind residues that form a coal-like black carbon film that preserves the outline and sometimes considerable organic details. Those thin films of carbon are often found on planes of sandstone or shale.

Permineralization or petrifaction is a type of preservation in which the soft tissue of the organism has decomposed and the remaining hard parts are flooded with groundwater saturated with secondary minerals, especially calcium carbonate (calcite) or silicate that precipitates out and fills the gaps/pores/interstitial spaces of the dead organism but does not replace existing material. Minute details are often well preserved, even down to the cellular level. Cementation occurs with time and pressure as secondary minerals lithify to form a rock (fossil) in the place of the original bone, teeth, shell, or wood, preserving an amazing amount of detail. Real World Example: A great and very popular illustration of this form of fossilization is petrified wood, as can be seen in the Petrified Forest National Park in northern Arizona. Vietnam produces the largest commercial quantities of black and brown petrified wood sold globally as well as some of the largest individual pieces. For example, in 2002 a 6.7 meter long rock with a diameter of 40-50 cm, was found in Hon Khoi, Vietnam, which is located about 50 miles north of Cam Ranh Bay.

Author’s Note: The celebrated mystery author Patricia Cornwell brought worldwide attention to human taphonomy in her best-selling 1994 novel, The Body Farm, in which she discussed the very real Anthropological Research Facility at the University of Tennessee—Knoxville, which is engaged in an effort to apply principles of physical anthropology to the study of human decomposition, or what is called forensic taphonomy. Check out the book, it contains a fictional but well-written account of the work of William Bass, founder of the decay research facility.



[1] Hai-lu You, et al. 2006. Nearly Modern Amphibious Bird from the Early Cretaceous of Northwestern China, Science 312(5780): 1640-1643.

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